Package index
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FMQ_Consolidated_List
- FMQ Consolidated List
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adae
- ADAE
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adae_risk_summary()
- ADAE Summary with Risk Statistics
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adlb
- ADLB
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adsl
- ADSL
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adsl_merge()
- Merge adsl dataset with the analysis dataset
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adsl_summary()
- Demographic Characteristics Table
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ae_forest_plot()
- Forest Plot of Adverse Events
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ae_pre_process
- ae_pre
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ae_pre_processor()
- Pre-processing data for Adverse Event domain specific reports
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ae_volcano_opts()
- Volcano Plot axis Options
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ae_volcano_plot()
- Generate Volcano Plot of Adverse Events from Risk values of treatment pairs
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as_plotly()
- Standard convert ggplot to plotly object
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bar_plot()
- Utility for Bar plot.
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box_plot()
- Create box plot - static and interactive output
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carver
carver-package
- carver: Clinical Analysis Reporting and Visualization Ensemble in R
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cm
- CM
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data_read()
- Read data from selected path or in-built defaults
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dataset_merge()
- Merge Datasets
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dataset_vignette()
- Output a Dataset in a Vignette
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display_bign_head()
- Attach bign value to table columns, modify column header labels
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edish_plot()
- eDISH Plot
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empty_plot()
- Empty plot with message
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empty_tbl()
- Return table if output is empty
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event_analysis_plot()
- Event graphs for FDA Medical queries
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event_df
- event_df
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forest_display()
- Display combined Forest Plot
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forest_plot_base()
- Forest Plot - base with errorbars
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forest_plot_scatter()
- Scatter plot to be included within forest plot
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g_seriescol()
- Set Colors to Series Variable to plot
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g_seriessym()
- Set Shapes to Series Variable to plot
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interval_plot()
- Patient-Level Interval Plot
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lab_abnormality_summary()
- Incidence of Laboratory Test Abnormalities (Without Regard to Baseline Abnormality)
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line_plot()
- Utility for Line Plot
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mcatstat()
- Summary analysis for categorical variables
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mentry()
- Read and process data with subsets and variables
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msumstat()
- Summary statistics for numeric data variable
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multi_interval()
- Aligned Interval Plot for Adverse Events and Concomitant Medication
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occ_tier_summary()
- Generic Occurrence Summary Tiered Table
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plot_aes_opts()
- Set Series Variable Options for color, shape and size
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plot_axis_opts()
- Plot Axes Options
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plot_display_bign()
- Return N count in plot legend (treatment)
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plotly_legend()
- Legend Positioning and Labeling for an interactive Plot
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process_edish_data()
- Process data for eDISH plot
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process_event_analysis()
- Process data for Event Analysis
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process_tornado_data()
- Pre-process data for tornado plot
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reverselog_trans()
- Reverse Log transformation of value to pass to scale options
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risk_stat()
- Calculate Risk Statistics for treatment pairs from pre-processed Adverse Events data
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riskdiff_wald()
- Calculate Risk difference
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round_f()
- Round and Format values
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run_app()
- Run the Shiny Application
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save_file()
- To save the reports generated in the application
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scatter_plot()
- Create Scatter Plot
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shape_to_sym()
- Recode Shapes to Numbers
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split_data_by_var()
- Split data by given variables into list
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split_section_headers()
- Return section headers according to splitting variables specified
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str_to_vec()
- Convert string to vector
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summary_functions()
- List of Summary Functions
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summary_row_cat()
- Insert Overall/Summary Row
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tbl_display()
- Create flextable output from display templates
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tbl_processor()
- Prepare data for general table display
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tbl_risk_labels()
- Labels for AE risk table
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tbl_to_plot()
- Convert dataframe into ggplot object table
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theme_cleany()
- Theme for ggplots with only X axis title/ticks
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theme_std()
- Standard ggplot theme
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tornado_plot()
- Tornado Plot
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var_start()
- Find column names with starting pattern